| ID | SAVERM_6881
| Type | CDS
|
| From | 8213876
| nt length | 1044
|
| To | 8214919
| aa length | 347
|
| Gene |
| pI | 4.8
|
| Definition | putative transcriptional regulator
| M.W (Da) | 36888
|
| Note | PF04198: Putative sugar-binding domain
| AseI frg. | G2
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1463 putative transcriptional regulator | 656 | 0.0e+00
|
| sgr | SGR_6064 putative transcriptional regulator | 627 | 0.0e+00
|
| sam | SAM23877_1522 Transcriptional regulator | 642 | 0.0e+00
|
| scab | SCAB75381 putative transcriptional regulator | 660 | 0.0e+00
|
| sace | SACE_4164 transcriptional regulator, DeoR family | 280 | 1.0e-93
|
| bsub | BG10982 deoR, yxxC; transcriptional repressor of the dra-nupC-pdp operon | 94 | 9.1e-21
|
| ecoli | gi|16129471 putative transcriptional regulator, sorC family [Escherichia coli K12] | 89 | 3.3e-19
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Sugar-bind | 1 | Putative sugar-binding domain | 81-330 | 226.4 | 2.9e-67
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059125844.1 | MULTISPECIES: sugar-binding domain-containing protein [uncla...
| 1668 | 0.0e+00 |
|
| 1664 | 0.0e+00 |
| WP_129796798.1 | MULTISPECIES: sugar-binding domain-containing protein [uncla...
| 1655 | 0.0e+00 |
| WP_055493012.1 | sugar-binding domain-containing protein [Streptomyces sp. TP...
| 1654 | 0.0e+00 |
| WP_202497561.1 | sugar-binding domain-containing protein [Streptomyces sp. SI...
| 1649 | 0.0e+00 |
| WP_073941895.1 | sugar-binding domain-containing protein [Streptomyces sp. TS...
| 1647 | 0.0e+00 |
| WP_043438471.1 | sugar-binding domain-containing protein [Streptomyces nodosu...
| 1647 | 0.0e+00 |
| WP_073899375.1 | MULTISPECIES: sugar-binding domain-containing protein [uncla...
| 1645 | 0.0e+00 |
| WP_158919278.1 | sugar-binding domain-containing protein [Streptomyces brouss...
| 1645 | 0.0e+00 |
| WP_141309410.1 | MULTISPECIES: sugar-binding domain-containing protein [Strep...
| 1644 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0909 | Seems to have no N-terminal signal seq.
|