| ID | SAVERM_6909
| Type | CDS
|
| From | 8241446
| nt length | 1422
|
| To | 8242867
| aa length | 473
|
| Gene |
| pI | 4.63
|
| Definition | putative integral membrane protein
| M.W (Da) | 49957
|
| Note | PF01595: Domain of unknown function DUF21, PF03471: Transporter associated domain, PF00571: CBS domain
| AseI frg. | T
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1436 putative integral membrane protein | 726 | 0.0e+00
|
| sgr | SGR_6097 putative integral membrane protein | 670 | 0.0e+00
|
| sam | SAM23877_1497 conserved exported protein of unknown function | 712 | 0.0e+00
|
| scab | SCAB75671 putative membrane protein | 735 | 0.0e+00
|
| sace | SACE_3832 protein of unknown function DUF21 | 348 | 4.0e-117
|
| nfar | nfa25130 hypothetical protein | 352 | 5.2e-98
|
| paer | PA5362 [gene=PA5362] [prot=conserved hypothetical protein] [comment=PA5362] | 176 | 3.1e-45
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF21 | 1 | Domain of unknown function DUF21 | 11-202 | 127.4 | 4.3e-37
|
| CorC_HlyC | 1 | Transporter associated domain | 363-432 | 58.1 | 6e-16
|
| CBS | 2 | CBS domain | 220-272, 289-337 | 42.8 | 5e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4227 | Seems to have a cleavable N-term signal seq.
|