| ID | SAVERM_6980
| Type | CDS
|
| From | 8338456
| nt length | 876
|
| To | 8339331
| aa length | 291
|
| Gene |
| pI | 4.84
|
| Definition | hypothetical protein
| M.W (Da) | 31437
|
| Note | PF05949: Bacterial protein of unknown function (DUF881)
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1385 hypothetical protein | 407 | 4.0e-145
|
| sgr | SGR_6144 conserved hypothetical protein | 357 | 8.0e-126
|
| sam | SAM23877_1443 putative membrane protein | 406 | 1.0e-144
|
| scab | SCAB76261 hypothetical protein | 403 | 2.0e-143
|
| mtub | gi|15608962 hypothetical protein Rv1825 [Mycobacterium tuberculosis H37Rv] | 133 | 1.2e-32
|
| cglu | gi|19553224 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 34 | 5.5e-03
|
| bsub | BG11490 ylxW; similar to hypothetical proteins | 73 | 1.7e-14
|
| ecoli | gi|49176458 hypothetical protein b4487 [Escherichia coli K12] | 35 | 3.4e-03
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF881 | 1 | Bacterial protein of unknown function (DUF881) | 154-286 | 138.0 | 1.9e-40
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_067379096.1 | DUF881 domain-containing protein [Streptomyces olivochromoge...
| 1018 | 3.6e-137 |
| WP_028800508.1 | DUF881 domain-containing protein [Streptomyces sp. 142MFCol3...
| 1015 | 1.0e-136 |
| WP_190169064.1 | MULTISPECIES: DUF881 domain-containing protein [Streptomyces...
| 1014 | 1.2e-136 |
| WP_059126593.1 | DUF881 domain-containing protein [Streptomyces sp. NRRL F-51...
| 1015 | 1.2e-136 |
| WP_075033618.1 | DUF881 domain-containing protein [Streptomyces mirabilis] >e...
| 1014 | 1.5e-136 |
| WP_060902423.1 | MULTISPECIES: DUF881 domain-containing protein [unclassified...
| 1013 | 1.8e-136 |
| WP_168527089.1 | DUF881 domain-containing protein [Streptomyces sp. RPA4-2] >...
| 1014 | 1.9e-136 |
| WP_095855891.1 | MULTISPECIES: DUF881 domain-containing protein [unclassified...
| 1011 | 3.6e-136 |
| WP_148007917.1 | DUF881 domain-containing protein [Streptomyces sp. me109] >l...
| 1011 | 5.1e-136 |
| WP_168489948.1 | MULTISPECIES: DUF881 domain-containing protein [Streptomyces...
| 1010 | 5.7e-136 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3909 | Seems to have no N-terminal signal seq.
|