| ID | SAVERM_6981
| Type | CDS
|
| From | 8339393
| nt length | 975
|
| To | 8340367
| aa length | 324
|
| Gene |
| pI | 6.51
|
| Definition | hypothetical protein
| M.W (Da) | 33859
|
| Note | PF00498: FHA domain
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1384 hypothetical protein | 459 | 3.0e-165
|
| sgr | SGR_6145 hypothetical protein | 396 | 7.0e-141
|
| sam | SAM23877_1442 hypothetical protein | 343 | 4.0e-121
|
| scab | SCAB76271 hypothetical protein | 337 | 1.0e-118
|
| sace | SACE_3845 FHA domain containing protein | 160 | 1.0e-49
|
| nfar | nfa24860 hypothetical protein | 157 | 1.5e-39
|
| mtub | gi|15608964 CONSERVED HYPOTHETICAL PROTEIN CFP17 [Mycobacterium tuberculosis H37Rv] | 152 | 2.9e-38
|
| cglu | gi|19552656 COG1716:FHA-domain-containing proteins [Corynebacterium glutamicum] | 145 | 1.9e-36
|
| bsub | BG14083 yvbJ; hypothetical protein | 41 | 4.9e-05
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| FHA | 1 | FHA domain | 248-311 | 67.5 | 9e-19
|
| Yop-YscD_cpl | 1 | Inner membrane component of T3SS, cytoplasmic domain | 232-319 | 61.6 | 6.4e-17
|
| zinc_ribbon_2 | 1 | zinc-ribbon domain | 152-173 | 32.5 | 4.2e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_189184562.1 | zinc-ribbon and FHA domain-containing protein [Streptomyces ...
| 1480 | 0.0e+00 |
| WP_099505503.1 | MULTISPECIES: zinc-ribbon and FHA domain-containing protein ...
| 1477 | 0.0e+00 |
| WP_165268100.1 | FHA domain-containing protein [Streptomyces scabichelini] >g...
| 1476 | 0.0e+00 |
| WP_078853998.1 | MULTISPECIES: FHA domain-containing protein [Streptomyces] >...
| 1475 | 0.0e+00 |
| WP_079065539.1 | zinc-ribbon and FHA domain-containing protein [Streptomyces ...
| 1474 | 0.0e+00 |
| WP_189779654.1 | zinc-ribbon and FHA domain-containing protein [Streptomyces ...
| 1472 | 0.0e+00 |
| WP_215451069.1 | MULTISPECIES: FHA domain-containing protein [unclassified St...
| 1471 | 0.0e+00 |
| WP_107018627.1 | MULTISPECIES: zinc-ribbon and FHA domain-containing protein ...
| 1471 | 0.0e+00 |
| WP_075033617.1 | MULTISPECIES: zinc-ribbon and FHA domain-containing protein ...
| 1470 | 0.0e+00 |
| WP_230224255.1 | FHA domain-containing protein [Streptomyces sp. MNU76] >lcl
| 1470 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1022 | Seems to have no N-terminal signal seq.
|