| ID | SAVERM_6984
| Type | CDS
|
| From | 8341986
| nt length | 636
|
| To | 8342621
| aa length | 211
|
| Gene |
| pI | 6.8
|
| Definition | hypothetical protein
| M.W (Da) | 22634
|
| Note |
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1381 hypothetical protein | 335 | 7.0e-119
|
| sgr | SGR_6148 conserved hypothetical protein | 333 | 9.0e-119
|
| sam | SAM23877_1439 hypothetical protein | 327 | 1.0e-116
|
| scab | SCAB76301 hypothetical protein | 320 | 1.0e-113
|
| sace | SACE_3843 transcriptional regulator, MerR family | 206 | 9.0e-69
|
| nfar | nfa24890 hypothetical protein | 194 | 3.7e-51
|
| mtub | gi|15608967 hypothetical protein Rv1830 [Mycobacterium tuberculosis H37Rv] | 217 | 5.4e-58
|
| cglu | gi|19552659 COG0789:Predicted transcriptional regulators [Corynebacterium glutamicum] | 189 | 8.5e-50
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MerR_1 | 1 | MerR HTH family regulatory protein | 57-123 | 51.3 | 8.7e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498678.1 | MerR family transcriptional regulator [Streptomyces sp. SID5...
| 1093 | 9.7e-151 |
| WP_097226473.1 | MerR family transcriptional regulator [Streptomyces sp. OV19...
| 1034 | 4.5e-142 |
| WP_075033615.1 | MerR family transcriptional regulator [Streptomyces mirabili...
| 1030 | 1.8e-141 |
| WP_181651989.1 | MerR family transcriptional regulator [Streptomyces sp. WAC0...
| 1024 | 1.9e-140 |
| WP_217567396.1 | MerR family transcriptional regulator [Streptomyces sp. Gbtc...
| 1023 | 2.0e-140 |
| WP_079090415.1 | MULTISPECIES: MerR family transcriptional regulator [unclass...
| 1023 | 2.4e-140 |
| WP_190169066.1 | MerR family transcriptional regulator [Streptomyces mirabili...
| 1019 | 8.5e-140 |
| WP_143626803.1 | MerR family transcriptional regulator [Streptomyces sp. RLB1...
| 1019 | 9.1e-140 |
| WP_095751211.1 | MerR family transcriptional regulator [Streptomyces sp. SA15...
| 1019 | 9.3e-140 |
| WP_079065538.1 | MerR family transcriptional regulator [Streptomyces olivochr...
| 1018 | 1.2e-139 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3153 | Seems to have no N-terminal signal seq.
|