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IDSAVERM_6986 TypeCDS
From8344895 nt length423
To8344473 aa length140
Gene pI4.46
Definitionhypothetical protein M.W (Da)15405
NotePF05239: PRC-barrel domain AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1379 hypothetical protein2176.0e-75
sgrSGR_6150 conserved hypothetical protein2031.0e-69
samSAM23877_1437 hypothetical protein2072.0e-71
scabSCAB76321 hypothetical protein2081.0e-71
nfarnfa18800 hypothetical protein721.1e-14

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PRC1PRC-barrel domain25-8734.31.7e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AVV43809.1 photosystem reaction center subunit H [Streptomyces sp. P3] 6784.1e-90
AVH60090.1 PRC-barrel domain containing protein [Streptomyces dengpaensis] >... 6611.5e-87
QJT00372.1 PRC-barrel domain containing protein [Streptomyces asoensis] 6602.3e-87
WP_223190609.1 PRC-barrel domain-containing protein [Streptomyces sp. TRM68... 6584.2e-87
OQR65706.1 photosystem reaction center subunit H [Streptomyces sp. B9173] 6523.5e-86
KOU72013.1 photosystem reaction center subunit H [Streptomyces sp. MMG1533] 6524.3e-86
PAZ14285.1 photosystem reaction center subunit H [Streptomyces sp. SA15] 6516.0e-86
RZB20154.1 PRC-barrel domain containing protein [Streptomyces sp. F001] 6508.2e-86
WP_234481758.1 MULTISPECIES: PRC-barrel domain-containing protein [unclassi... 6421.1e-84
MYS40097.1 PRC-barrel domain containing protein [Streptomyces sp. SID5998] 6394.4e-84

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4580 Seems to have no N-terminal signal seq.