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IDSAVERM_7002 TypeCDS
From8363460 nt length900
To8364359 aa length299
Gene pI7.07
Definitionputative LysR-family transcriptional regulator M.W (Da)32127
NotePF03466: LysR substrate binding domain AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1358 putative LysR-family transcriptional regulator5210.0e+00
sgrSGR_6174 putative LysR-family transcriptional regulator4262.0e-152
samSAM23877_1416 putative LysR-family transcriptional regulator5230.0e+00
scabSCAB76481 putative LysR-family transcriptional regulator4681.0e-168
saceSACE_4699 transcriptional regulator, LysR family1593.0e-47
paerPA3433 [gene=PA3433] [prot=probable transcriptional regulator] [comment=PA3433]1154.9e-27

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain87-294131.82e-38

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6278.03.6e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_150956988.1 LysR family transcriptional regulator [Streptomyces luteolif... 11881.3e-162
WP_189150676.1 LysR family transcriptional regulator [Streptomyces lacrimif... 11844.5e-162
WP_217242124.1 LysR family transcriptional regulator [Streptomyces sp. AC55... 11801.9e-161
WP_161065384.1 LysR family transcriptional regulator [Streptomyces sp. HUCO... 11801.9e-161
WP_075032545.1 LysR family transcriptional regulator [Streptomyces mirabili... 11784.0e-161
WP_168489933.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11776.4e-161
WP_143612832.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11768.6e-161
WP_097283832.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11741.7e-160
WP_060902435.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11741.8e-160
WP_099923879.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11723.0e-160

PSORT result

LocalizationCertaintyPSORT said
membrane0.3569 Seems to have no N-terminal signal seq.