| ID | SAVERM_7081
| Type | CDS
|
| From | 8444195
| nt length | 1347
|
| To | 8442849
| aa length | 448
|
| Gene |
| pI | 4.89
|
| Definition | putative integral membrane protein
| M.W (Da) | 47439
|
| Note | PF01595: Domain of unknown function DUF21
| AseI frg. | D
|
| SignalP v.4.0 | Signal peptide | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1251 putative integral membrane protein | 677 | 0.0e+00
|
| sgr | SGR_6275 putative integral membrane protein | 679 | 0.0e+00
|
| sam | SAM23877_1338 conserved exported protein of unknown function | 716 | 0.0e+00
|
| scab | SCAB78111 putative integral membrane protein | 715 | 0.0e+00
|
| mtub | gi|15608979 hypothetical protein Rv1842c [Mycobacterium tuberculosis H37Rv] | 328 | 5.8e-91
|
| cglu | gi|19552664 COG1253:Hemolysins and related proteins containing CBS domains [Corynebacterium glutamicum] | 327 | 6.9e-91
|
| bsub | BG13026 yhdT; similar to hemolysin | 208 | 4.5e-55
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF21 | 1 | Domain of unknown function DUF21 | 9-201 | 112.8 | 1.3e-32
|
| CorC_HlyC | 1 | Transporter associated domain | 364-431 | 61.7 | 4.5e-17
|
| CBS | 2 | CBS domain | 219-272, 283-335 | 41.5 | 1.3e-10
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4333 | Seems to have a cleavable N-term signal seq.
|