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IDSAVERM_7096 TypeCDS
From8459587 nt length852
To8458736 aa length283
Gene pI7.1
Definitionputative DNA-binding protein M.W (Da)31334
NotePF01381: Helix-turn-helix AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1242 putative DNA-binding protein4443.0e-160
sgrSGR_6285 putative DNA-binding protein3634.0e-128
samSAM23877_1330 putative DNA-binding protein4525.0e-163
scabSCAB78261 putative DNA-binding protein4347.0e-156
saceSACE_1895 transcriptional regulator, XRE family1991.0e-63
mtubgi|15609158 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN [Mycobacterium tuberculosis H37Rv]314.8e-02
ecoligi|16131515 putative alpha helix protein [Escherichia coli K12]314.8e-02

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain12-7362.63e-17

HTH_31Helix-turn-helix16-6826.64.2e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_103838984.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12926.7e-179
WP_200422101.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12874.0e-178
WP_220294970.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12711.1e-175
WP_059126703.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12665.7e-175
WP_234518080.1 helix-turn-helix domain-containing protein [Streptomyces glo... 12534.8e-173
WP_110626705.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12405.3e-171
NUQ97277.1 helix-turn-helix domain-containing protein [Streptomyces sp.] 12301.8e-169
WP_123963644.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12283.8e-169
WP_095751927.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12274.4e-169
WP_124444168.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12275.1e-169

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2394 Seems to have no N-terminal signal seq.