| ID | SAVERM_7118
| Type | CDS
|
| From | 8477246
| nt length | 1206
|
| To | 8478451
| aa length | 401
|
| Gene | lytS
| pI | 6.33
|
| Definition | putative two-component system sensor kinase
| M.W (Da) | 43581
|
| Note | PF07730: Histidine kinase
| AseI frg. | D
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | sensors
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1217 putative kinase | 696 | 0.0e+00
|
| sgr | SGR_720 putative two-component system sensor kinase | 553 | 0.0e+00
|
| sam | SAM23877_1297 putative sensor kinase | 721 | 0.0e+00
|
| scab | SCAB78531 putative two-component system sensor kinase | 714 | 0.0e+00
|
| sace | SACE_0115 sensor kinase, two-component system | 352 | 8.0e-120
|
| nfar | nfa17980 two-component system sensor kinase | 338 | 6.4e-94
|
| bsub | BG11952 lytS; two-component sensor histidine kinase. potential cognate response regulator is LytT | 151 | 5.7e-38
|
| ecoli | gi|16130064 putative 2-component sensor protein [Escherichia coli K12] | 171 | 1.0e-43
|
| paer | PA5262 [gene=algZ] [prot=alginate biosynthesis protein AlgZ/FimS] [comment=PA5262] | 86 | 4.6e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| His_kinase | 1 | Histidine kinase | 190-268 | 81.5 | 3.7e-23
|
| HATPase_c | 1 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 288-387 | 37.5 | 2.7e-09
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1447 | Seems to have a cleavable N-term signal seq.
|