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IDSAVERM_7178 TypeCDS
From8546770 nt length1290
To8545481 aa length429
Gene pI7.16
Definitionputative transcriptional regulator M.W (Da)45650
NotePF00486: Transcriptional regulatory protein, C terminal AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1173 putative transcriptional regulator6590.0e+00
sgrSGR_350 putative transcriptional regulator5340.0e+00
samSAM23877_1261 putative 47.3 kDa protein in thcA 5'region6340.0e+00
scabSCAB79821 putative transcriptional regulator6500.0e+00
nfarnfa50640 transcriptional regulator2485.5e-67

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF1GAF domain107-21733.93.9e-08

Trans_reg_C1Transcriptional regulatory protein, C terminal248-30423.15.2e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055489561.1 GAF domain-containing protein [Streptomyces sp. TP-A0356] 15660.0e+00
WP_153292040.1 GAF domain-containing protein [Streptomyces fagopyri] >gb 15610.0e+00
WP_168526905.1 GAF domain-containing protein [Streptomyces sp. RPA4-2] >gb 15580.0e+00
WP_165254323.1 GAF domain-containing protein [Streptomyces scabichelini] >g... 15480.0e+00
WP_210586313.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15480.0e+00
WP_236041608.1 GAF domain-containing protein [Streptomyces sp. Y2F8-2] >dbj... 15430.0e+00
WP_119105529.1 GAF domain-containing protein [Streptomyces sporangiiformans... 15430.0e+00
WP_234022190.1 GAF domain-containing protein [Streptomyces ipomoeae] 15410.0e+00
WP_152772407.1 GAF domain-containing protein [Streptomyces spongiae] 15410.0e+00
WP_201452446.1 GAF domain-containing protein [Streptomyces sp. HM190] 15400.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3952 Seems to have no N-terminal signal seq.