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IDSAVERM_7241 TypeCDS
From8634076 nt length2640
To8636715 aa length879
GeneclpB2 pI5
Definitionputative ATP-dependent Clp protease M.W (Da)98274
NotePF07724: ATPase family associated with various cellular activities (AAA) AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categoryprotein folding


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB84631 putative ATP-dependent Clp protease16420.0e+00
paerPA4542 [gene=clpB] [prot=ClpB protein] [comment=PA4542]9240.0e+00

*scab, Streptomyces scabies 87.22; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_21AAA domain (Cdc48 subfamily)604-770194.81.1e-57

Clp_N2Clp amino terminal domain, pathogenicity island component17-68, 97-15096.37.7e-28

ClpB_D2-small1C-terminal, D2-small domain, of ClpB protein776-85686.11.1e-24

AAA2ATPase family associated with various cellular activities (AAA)208-340, 610-73183.61.5e-23

AAA_51AAA domain (dynein-related subfamily)609-73065.93.4e-18

Sigma54_activat1Sigma-54 interaction domain609-72534.51.4e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_097283213.1 ATP-dependent chaperone ClpB [Streptomyces sp. OK228] >emb 38610.0e+00
WP_075033264.1 ATP-dependent chaperone ClpB [Streptomyces mirabilis] >emb 38600.0e+00
WP_168499989.1 ATP-dependent chaperone ClpB [Streptomyces sp. RLB1-33] >gb 38560.0e+00
WP_067378131.1 ATP-dependent chaperone ClpB [Streptomyces olivochromogenes]... 38460.0e+00
WP_189712649.1 ATP-dependent chaperone ClpB [Streptomyces phaeofaciens] >db... 38350.0e+00
WP_181649317.1 ATP-dependent chaperone ClpB [Streptomyces sp. WAC00263] >lc... 38330.0e+00
WP_142267241.1 MULTISPECIES: ATP-dependent chaperone ClpB [unclassified Str... 38330.0e+00
WP_103547638.1 ATP-dependent chaperone ClpB [Streptomyces populi] >gb 38240.0e+00
WP_217572862.1 ATP-dependent chaperone ClpB [Streptomyces sp. GbtcB7] 38170.0e+00
WP_190174817.1 ATP-dependent chaperone ClpB [Streptomyces mirabilis] >dbj 38170.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.4286 Seems to have no N-terminal signal seq.