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IDSAVERM_7336 TypeCDS
From8751955 nt length498
To8752452 aa length165
Gene pI6.9
Definitionputative integral membrane protein M.W (Da)18105
NotePF09323: Domain of unknown function (DUF1980) AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6327 putative integral membrane protein2281.0e-78
sgrSGR_834 putative integral membrane protein1471.0e-46
samSAM23877_0396 putative integral membrane protein2231.0e-76
scabSCAB81631 putative integral membrane protein2353.0e-81
paerPA2170 [gene=PA2170] [prot=hypothetical protein] [comment=PA2170]314.9e-02

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SHOCT1Short C-terminal domain110-13628.58e-07

PLDc_N1Phospholipase_D-nuclease N-terminal27-7328.11.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189931182.1 SHOCT domain-containing protein [Streptomyces aurantiogriseu... 4751.7e-58
WP_200400348.1 SHOCT domain-containing protein [Streptomyces sp. ZYC-3] >gb... 4741.9e-58
WP_030040720.1 SHOCT domain-containing protein [Streptomyces resistomycific... 4733.5e-58
WP_037926013.1 SHOCT domain-containing protein [Streptomyces toyocaensis] >... 4715.8e-58
WP_033309798.1 SHOCT domain-containing protein [Streptomyces iakyrus] 4681.6e-57
WP_060885696.1 SHOCT domain-containing protein [Streptomyces caniscabiei] 4673.1e-57
WP_196465275.1 SHOCT domain-containing protein [Streptomyces spinoverrucosu... 4655.4e-57
WP_190057248.1 SHOCT domain-containing protein [Streptomyces echinoruber] >... 4639.6e-57
WP_153291919.1 SHOCT domain-containing protein [Streptomyces fagopyri] >gb 4611.6e-56
WP_124441420.1 SHOCT domain-containing protein [Streptomyces sp. NL15-2K] >... 4611.9e-56

PSORT result

LocalizationCertaintyPSORT said
membrane0.6328 Seems to have a cleavable N-term signal seq.