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IDSAVERM_7500 TypeCDS
From8939205 nt length1896
To8937310 aa length631
GeneamfA pI8.03
Definitionputative ABC transporter ATP-binding protein, AmfA M.W (Da)65189
NoteAmfA/RamB homolog protein, PF00005: ABC transporter AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6684 putative ABC transporter4533.0e-153
sgrSGR_2394 membrane translocator3621.0e-117
samSAM23877_6341 putative ABC transporter2511.0e-74
scabSCAB8641 putative ABC transporter ATP-binding protein, AmfA7120.0e+00
saceSACE_4029 putative ABC transporter ATP-binding protein3422.0e-110

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter345-48772.93.4e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SFN31308.1 ATP-binding cassette, subfamily C [Streptomyces sp. cf124] 14250.0e+00
14250.0e+00
WP_086800480.1 unnamed protein product [Streptomyces caniscabiei] 13980.0e+00
WP_225617637.1 ABC transporter ATP-binding protein/permease [Streptomyces c... 13830.0e+00
ELP66826.1 ABC transporter, ATP-binding protein [Streptomyces turgidiscabies... 13442.1e-176
GAQ72040.1 putative multidrug export ATP-binding/permease protein [Streptom... 13421.1e-175
SEE81288.1 ATP-binding cassette, subfamily C [Streptomyces sp. KS_5] 13401.7e-175
GGW95146.1 ABC transporter ATP-binding protein [Streptomyces chartreusis] 13383.8e-175
GGJ13007.1 ABC transporter ATP-binding protein [Streptomyces lacrimiflumini... 13384.7e-175
SED67706.1 ATP-binding cassette, subfamily C [Streptomyces sp. PAN_FS17] 13271.5e-173

PSORT result

LocalizationCertaintyPSORT said
membrane0.4758 Seems to have no N-terminal signal seq.