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IDSAVERM_7501 TypeCDS
From8940989 nt length1788
To8939202 aa length595
GeneamfB pI11.32
Definitionputative ABC transporter ATP-binding membrane translocator, AmfB M.W (Da)61333
NoteAmfB/RamA homolog protein, PF00005: ABC transporter AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6683 putative ABC transporter4071.0e-135
sgrSGR_2395 membrane translocator3306.0e-106
samSAM23877_6340 ABC transporter ATP-binding protein3995.0e-133
scabSCAB8631 putative ABC transporter ATP-binding membrane translocator, AmfB6600.0e+00
saceSACE_4028 ABC transporter protein, ATP-binding component3604.0e-118

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter370-51676.13.3e-21

ABC_membrane1ABC transporter transmembrane region46-30572.63.8e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055617657.1 ABC transporter ATP-binding protein/permease [Streptomyces p... 11766.7e-152
GHB77634.1 ABC transporter ATP-binding protein [Streptomyces umbrinus] 11671.2e-150
WP_189844249.1 ABC transporter ATP-binding protein/permease [Streptomyces u... 11673.1e-150
GHH64198.1 ABC transporter ATP-binding protein [Streptomyces umbrinus] 11565.9e-149
WP_190232105.1 ABC transporter ATP-binding protein/permease [Streptomyces u... 11552.1e-148
WP_151475821.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 11391.7e-146
WP_143635158.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 11316.2e-145
ANS69967.1 ABC transporter ATP-binding membrane translocator, AmfB [Streptom... 11104.5e-142
WP_094221993.1 ABC transporter ATP-binding protein/permease [Streptomyces d... 11078.3e-142
WP_067443482.1 ABC transporter ATP-binding protein/permease [Streptomyces l... 11071.3e-141

PSORT result

LocalizationCertaintyPSORT said
membrane0.3909 Seems to have a cleavable N-term signal seq.