-- | --

IDSAVERM_909 TypeCDS
From1088612 nt length924
To1089535 aa length307
Genesig11 pI4.86
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)34199
NotePF04542: Sigma-70 region 2 AseI frg.A
SignalP v.4.0Non-secretory protein | plot CategoryRNA initiation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 27-6949.13.2e-13

Sigma70_r4_21Sigma-70, region 4105-15641.28.8e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497666.1 RNA polymerase sigma-70 factor [Streptomyces sp. SID5469] 13500.0e+00
WP_095857152.1 RNA polymerase sigma-70 factor [Streptomyces sp. Ag82_O1-15]... 12177.9e-167
WP_067382638.1 RNA polymerase sigma-70 factor [Streptomyces olivochromogene... 12133.1e-166
WP_217574597.1 RNA polymerase sigma-70 factor [Streptomyces sp. GbtcB7] 12091.6e-165
WP_168486854.1 RNA polymerase sigma-70 factor [Streptomyces sp. RLB1-33] >g... 12031.1e-164
WP_075030721.1 RNA polymerase sigma-70 factor [Streptomyces mirabilis] >emb... 12012.3e-164
WP_144314532.1 RNA polymerase sigma-70 factor [Streptomyces sp. RLB3-17] >g... 11979.3e-164
WP_181647437.1 RNA polymerase sigma-70 factor [Streptomyces sp. WAC00263] >... 11971.0e-163
WP_143606559.1 MULTISPECIES: RNA polymerase sigma-70 factor [unclassified S... 11933.7e-163
WP_097288373.1 RNA polymerase sigma-70 factor [Streptomyces sp. OK228] >emb... 11891.5e-162

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1146 Seems to have no N-terminal signal seq.