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IDSAVERM_916 TypeCDS
From1094980 nt length1401
To1096380 aa length466
GenelysA2 pI7.81
Definitionputative diaminopimelate decarboxylase M.W (Da)49212
NotePF02784: Pyridoxal-dependent decarboxylase, pyridoxal binding domain AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorymetabolism of amino acids & related molecules

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_2680 putative diaminopimelate decarboxylase6100.0e+00
ecoligi|16130742 diaminopimelate decarboxylase [Escherichia coli K12]1571.1e-39
paerPA5277 [gene=lysA] [prot=diaminopimelate decarboxylase] [comment=PA5277]2064.7e-54

*sgr, Streptomyces griseus IFO13350; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Orn_Arg_deC_N1Pyridoxal-dependent decarboxylase, pyridoxal binding domain77-329202.08.9e-60

Orn_DAP_Arg_deC1Pyridoxal-dependent decarboxylase, C-terminal sheet domain186-42162.92.3e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_229703614.1 diaminopimelate decarboxylase [Streptomyces albiflavescens] ... 20250.0e+00
WP_078878931.1 diaminopimelate decarboxylase [Streptomyces sp. NRRL B-24720... 20170.0e+00
WP_093770146.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 20120.0e+00
WP_030980617.1 diaminopimelate decarboxylase [Streptomyces sp. NRRL S-1824] 19790.0e+00
WP_142264169.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 19700.0e+00
WP_212728272.1 diaminopimelate decarboxylase [Streptomyces mirabilis] >gb 19640.0e+00
WP_143628589.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 19570.0e+00
WP_217568240.1 diaminopimelate decarboxylase [Streptomyces sp. GbtcB7] 19550.0e+00
WP_143603328.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 19540.0e+00
WP_143609540.1 MULTISPECIES: diaminopimelate decarboxylase [unclassified St... 19510.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1255 Seems to have no N-terminal signal seq.