-- | --

IDSCAB11491 TypeCDS
From8854243 nt length885
To8853359 aa length294
Gene pI9.29
Definitionputative LysR-family transcriptional regulator M.W (Da)32095
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7306 putative LysR-family transcriptional regulator5401.0e-154
coelSCO0925 putative lysR-family transcriptional regulator5277.0e-151
sgrSGR_708 putative LysR-family transcriptional regulator4646.0e-132
nfarnfa30720 putative transcriptional regulator1371.0e-33

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-293157.32.9e-46

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6282.61.2e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060905917.1 LysR family transcriptional regulator [Streptomyces scabiei] 12548.0e-174
WP_045561574.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12372.8e-171
GAQ65106.1 HTH-type transcriptional regulator GltC [Streptomyces scabiei] 12374.4e-171
WP_059082504.1 LysR family transcriptional regulator [Streptomyces scabiei] 12354.7e-171
WP_005484355.1 LysR family transcriptional regulator [Streptomyces bottrope... 12303.5e-170
WP_037698859.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12286.0e-170
WP_033532435.1 LysR family transcriptional regulator [Streptomyces galbus] 12242.6e-169
WP_009301082.1 LysR substrate binding domain protein [Streptomyces ipomoeae... 12233.7e-169
WP_046917177.1 LysR family transcriptional regulator [Streptomyces stellisc... 12225.6e-169
WP_055522353.1 LysR family transcriptional regulator [Streptomyces ossamyce... 12121.5e-167

PSORT result

LocalizationCertaintyPSORT said
Not Clear