ID	SCAB11621	Type	CDS
From	8842167	nt length	546
To	8841622	aa length	181
Gene	sig	pI	7.19
Definition	putative RNA polymerase ECF-subfamily sigma factor	M.W (Da)	20081
Note		AseI frg.	E
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	22-89	54.3	7.4e-15
	Sigma70_r4	1	Sigma-70, region 4	123-171	50.0	1.4e-13
	Sigma70_r4_2	1	Sigma-70, region 4	118-169	46.0	2.7e-12
	Sigma70_ECF	1	ECF sigma factor	42-165	30.9	2.1e-07

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_061334782.1	RNA polymerase subunit sigma [Streptomyces scabiei]	726	3.4e-97
WP_020115161.1	MULTISPECIES: RNA polymerase sigma factor SigL [Streptomyces...	720	2.7e-96
WP_019057583.1	RNA polymerase sigma factor SigL [Streptomyces prunicolor]	720	3.1e-96
WP_067030893.1	RNA polymerase subunit sigma [Streptomyces sp. RV15] >gb	720	3.1e-96
WP_048820269.1	RNA polymerase sigma factor SigL [Streptomyces ipomoeae]	720	3.1e-96
WP_059085071.1	RNA polymerase subunit sigma [Streptomyces scabiei]	720	3.5e-96
WP_059194796.1	RNA polymerase subunit sigma [Streptomyces antibioticus] >gb...	720	3.6e-96
WP_055522338.1	MULTISPECIES: RNA polymerase subunit sigma [Streptomyces]	719	4.4e-96
WP_030935160.1	RNA polymerase sigma factor SigL [Streptomyces sp. NRRL S-64...	719	4.7e-96
WP_033532425.1	RNA polymerase sigma factor SigL [Streptomyces galbus]	718	5.9e-96

PSORT result

Localization	Certainty	PSORT said
Not Clear

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