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IDSCAB16931 TypeCDS
From8241320 nt length885
To8240436 aa length294
Gene pI9.96
Definitionputative LysR-family transcriptional regulator M.W (Da)32237
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1845 putative LysR-family transcriptional regulator4852.0e-138
coelSCO6555 LysR-type transcriptional regulator4822.0e-137
sgrSGR_1124 putative LysR-family transcriptional regulator4053.0e-114
nfarnfa30710 putative transcriptional regulator2484.0e-67

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain90-269109.91e-31

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family9-6673.96.5e-21

HTH_201Helix-turn-helix domain14-4728.88.8e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037722688.1 LysR family transcriptional regulator [Streptomyces scabiei] 13150.0e+00
WP_059082234.1 LysR family transcriptional regulator [Streptomyces scabiei] 13130.0e+00
WP_086022932.1 LysR family transcriptional regulator [Streptomyces scabiei] 12991.0e-180
KFG10750.1 LysR family transcriptional regulator [Streptomyces scabiei] 12953.0e-180
GAQ64766.1 hca operon transcriptional activator [Streptomyces scabiei] 12945.4e-180
WP_046913154.1 LysR family transcriptional regulator [Streptomyces stellisc... 12754.6e-177
WP_005482491.1 LysR family transcriptional regulator [Streptomyces bottrope... 12712.1e-176
WP_060906023.1 LysR family transcriptional regulator, partial [Streptomyces... 12581.2e-174
WP_037704335.1 LysR family transcriptional regulator [Streptomyces scabiei] 12591.2e-174
WP_046705868.1 LysR family transcriptional regulator [Streptomyces europaei... 12591.4e-174

PSORT result

LocalizationCertaintyPSORT said
Not Clear