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IDSCAB17081 TypeCDS
From8219670 nt length837
To8218834 aa length278
Gene pI5.74
Definitionputative DNA-binding protein M.W (Da)31771
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1861 putative DNA-binding protein4517.0e-128
coelSCO6537 hypothetical protein4392.0e-124

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain6-6640.81.9e-10

HTH_31Helix-turn-helix10-6126.44.8e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037729748.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13740.0e+00
WP_005482465.1 transcriptional regulator [Streptomyces bottropensis] >gb 13190.0e+00
WP_046919184.1 XRE family transcriptional regulator [Streptomyces stellisca... 13170.0e+00
WP_059082248.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13050.0e+00
WP_060903563.1 XRE family transcriptional regulator [Streptomyces europaeis... 12990.0e+00
WP_086799682.1 transcriptional regulator [Streptomyces scabiei] 12908.6e-180
WP_086749879.1 transcriptional regulator [Streptomyces scabiei] 12881.7e-179
WP_045556621.1 MULTISPECIES: transcriptional regulator [Streptomyces] >emb 12882.1e-179
WP_060893910.1 transcriptional regulator [Streptomyces europaeiscabiei] 12864.4e-179
WP_037704353.1 transcriptional regulator [Streptomyces scabiei] >gb 12855.3e-179

PSORT result

LocalizationCertaintyPSORT said
Not Clear