-- | --

IDSCAB18051 TypeCDS
From8112459 nt length276
To8112734 aa length91
Gene pI9.79
Definitionputative DNA-binding protein M.W (Da)9599
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1955 putative DNA-binding protein1351.0e-33
coelSCO6410 hypothetical protein1243.0e-30
sgrSGR_1236 putative DNA-binding protein1242.0e-30
saceSACE_3597 transcriptional regulator, XRE family1097.0e-26
nfarnfa31330 putative DNA-binding protein911.0e-20

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7348.57.5e-13

HTH_31Helix-turn-helix20-7438.11.1e-09

HTH_261Cro/C1-type HTH DNA-binding domain24-7628.91e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060881211.1 XRE family transcriptional regulator [Streptomyces scabiei] 2667.5e-30
WP_059081400.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 2651.0e-29
WP_046917576.1 XRE family transcriptional regulator [Streptomyces stellisca... 2622.6e-29
WP_005482250.1 XRE family transcriptional regulator [Streptomyces bottropen... 2622.6e-29
WP_045556516.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 2501.8e-27
WP_033529856.1 XRE family transcriptional regulator [Streptomyces galbus] 2502.1e-27
WP_006382737.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 2466.2e-27
WP_086751008.1 XRE family transcriptional regulator [Streptomyces scabiei] 2466.8e-27
WP_046733830.1 XRE family transcriptional regulator [Streptomyces humi] 2458.2e-27
WP_060890377.1 XRE family transcriptional regulator [Streptomyces europaeis... 2468.7e-27

PSORT result

LocalizationCertaintyPSORT said
Not Clear