| ID | SCAB24441 | Type | CDS |
| From | 7385322 | nt length | 1551 |
| To | 7386872 | aa length | 516 |
| Gene | rpoD | pI | 5.93 |
| Definition | RNA polymerase major sigma factor, sigma-70 family | M.W (Da) | 56344 |
| Note | AseI frg. | B | |
| SignalP v.4.0 | Non-secretory protein | plot | Category |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| avm | SAVERM_2444 RNA polymerase major sigma factor, sigma-70 family | 857 | 0.0e+00 |
| coel | SCO5820 major vegetative sigma factor rpoD | 864 | 0.0e+00 |
| sgr | SGR_1701 RNA polymerase principal sigma factor hrdB | 820 | 0.0e+00 |
| sace | SACE_1801 RNA polymerase major sigma factor | 532 | 3.0e-152 |
| nfar | nfa37590 putative principal sigma factor | 514 | 5.0e-147 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| Sigma70_r3 | 1 | Sigma-70 region 3 | 362-438 | 100.8 | 2.9e-29 | |
| Sigma70_r2 | 1 | Sigma-70 region 2 | 283-352 | 78.9 | 1.7e-22 | |
| Sigma70_r4 | 1 | Sigma-70, region 4 | 451-504 | 69.6 | 1.1e-19 | |
| Sigma70_r1_2 | 1 | Sigma-70 factor, region 1.2 | 218-251 | 62.8 | 2e-17 |
| ID | Description | Score | E-value |
| KFG09629.1 | RNA polymerase sigma factor [Streptomyces scabiei] | 2036 | 0.0e+00 |
| WP_041670560.1 | RNA polymerase sigma factor [Streptomyces scabiei] | 2021 | 0.0e+00 |
| WP_037724082.1 | RNA polymerase sigma factor [Streptomyces scabiei] | 2019 | 0.0e+00 |
| KND40750.1 | RNA polymerase sigma factor [Streptomyces stelliscabiei] | 2015 | 0.0e+00 |
| WP_059081569.1 | RNA polymerase sigma factor [Streptomyces scabiei] >dbj | 2008 | 0.0e+00 |
| WP_045561176.1 | RNA polymerase sigma factor [Streptomyces sp. FxanaA7] | 2008 | 0.0e+00 |
| WP_060883030.1 | MULTISPECIES: RNA polymerase sigma factor [Streptomyces] | 2006 | 0.0e+00 |
| WP_093790499.1 | RNA polymerase sigma factor [Streptomyces sp. cf124] >emb | 2003 | 0.0e+00 |
| WP_046913417.1 | RNA polymerase sigma factor [Streptomyces stelliscabiei] | 1999 | 0.0e+00 |
| WP_033525269.1 | RNA polymerase sigma factor [Streptomyces galbus] | 1993 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| Not Clear |