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IDSCAB25451 TypeCDS
From7252312 nt length1161
To7253472 aa length386
GeneispG pI5.31
Definitionputative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase M.W (Da)40702
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2561 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7440.0e+00
coelSCO5696 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7330.0e+00
sgrSGR_1821 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7140.0e+00
saceSACE_5992 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6330.0e+00
nfarnfa41180 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6550.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GcpE1GcpE protein23-362449.47.3e-135

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_086016325.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 20060.0e+00
WP_045561391.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate sy... 19990.0e+00
WP_086755710.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19980.0e+00
WP_060883087.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate sy... 19950.0e+00
WP_086800535.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19940.0e+00
WP_033526996.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19810.0e+00
WP_037728271.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19800.0e+00
WP_086749117.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19760.0e+00
WP_059082539.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19730.0e+00
WP_046913131.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Strept... 19700.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear