-- | --

IDSCAB27251 TypeCDS
From7040086 nt length2220
To7042305 aa length739
GeneligA pI4.89
Definitionputative DNA ligase M.W (Da)81143
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2748 putative DNA ligase12330.0e+00
coelSCO5494 SC8D9.06 putative DNA ligase12130.0e+00
sgrSGR_2021 putative DNA ligase11400.0e+00
saceSACE_6177 DNA ligase, NAD-dependent7660.0e+00
nfarnfa42650 putative DNA ligase7580.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_aden1NAD-dependent DNA ligase adenylation domain21-336400.73.5e-120

DNA_ligase_OB1NAD-dependent DNA ligase OB-fold domain340-416100.33.8e-29

HHH_21Helix-hairpin-helix motif565-62879.71.1e-22

BRCT1BRCA1 C Terminus (BRCT) domain649-71947.81.3e-12

DNA_ligase_ZBD1NAD-dependent DNA ligase C4 zinc finger domain426-45433.62.6e-08

HHH_51Helix-hairpin-helix domain569-61430.15e-07

PTCB-BRCT1twin BRCT domain656-71526.73.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060878240.1 NAD-dependent DNA ligase LigA [Streptomyces scabiei] 37070.0e+00
WP_005480005.1 NAD-dependent DNA ligase LigA [Streptomyces bottropensis] >g... 35900.0e+00
WP_046920365.1 NAD-dependent DNA ligase LigA [Streptomyces stelliscabiei] >... 35890.0e+00
WP_060890649.1 NAD-dependent DNA ligase LigA [Streptomyces europaeiscabiei] 35860.0e+00
WP_059084426.1 NAD-dependent DNA ligase LigA [Streptomyces scabiei] >dbj 35690.0e+00
WP_046704068.1 NAD-dependent DNA ligase LigA [Streptomyces europaeiscabiei] 35530.0e+00
WP_051947754.1 NAD-dependent DNA ligase LigA [Streptomyces scabiei] >gb 35380.0e+00
WP_086751157.1 NAD-dependent DNA ligase LigA [Streptomyces scabiei] 34730.0e+00
WP_045562511.1 MULTISPECIES: NAD-dependent DNA ligase LigA [Streptomyces] 33820.0e+00
SFN14482.1 DNA ligase (NAD+) [Streptomyces sp. cf124] 33790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear