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IDSCAB28891 TypeCDS
From6857564 nt length1077
To6858640 aa length358
GeneprfA pI4.75
Definitionputative peptide chain release factor 1 M.W (Da)39471
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2912 putative peptide chain release factor 16560.0e+00
coelSCO5360 prfA peptide chain release factor6590.0e+00
sgrSGR_2176 putative peptide chain release factor 16760.0e+00
saceSACE_6292 putative peptide chain release factor 14516.0e-128
nfarnfa10540 putative peptide chain release factor 14184.0e-118

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PCRF1PCRF domain11-206227.89.1e-68

RF-11RF-1 domain214-323134.91e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059083615.1 peptide chain release factor 1 [Streptomyces scabiei] >dbj 15630.0e+00
WP_060878278.1 peptide chain release factor 1 [Streptomyces scabiei] 15620.0e+00
WP_046705586.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] 15590.0e+00
WP_046917285.1 peptide chain release factor 1 [Streptomyces stelliscabiei] ... 15560.0e+00
WP_037695359.1 peptide chain release factor 1 [Streptomyces scabiei] >gb 15540.0e+00
WP_086757581.1 peptide chain release factor 1 [Streptomyces scabiei] 15510.0e+00
WP_005480271.1 peptide chain release factor 1 [Streptomyces bottropensis] >... 15490.0e+00
WP_045558938.1 MULTISPECIES: peptide chain release factor 1 [Streptomyces] ... 15480.0e+00
WP_086797444.1 peptide chain release factor 1 [Streptomyces scabiei] 15460.0e+00
WP_033526521.1 peptide chain release factor 1 [Streptomyces galbus] 15360.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear