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IDSCAB29491 TypeCDS
From6788597 nt length1125
To6789721 aa length374
Geneku pI9.81
Definitionputative Ku70/Ku80 protein M.W (Da)39556
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2945 putative Ku70/Ku80 protein4655.0e-132
coelSCO5309 hypothetical protein4646.0e-132
sgrSGR_2195 putative Ku70/Ku80 protein4293.0e-121
saceSACE_3709 DNA binding protein, Ku-like2133.0e-56
nfarnfa34910 hypothetical protein1871.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ku1Ku70/Ku80 beta-barrel domain14-193114.74.1e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060881447.1 Ku protein [Streptomyces scabiei] 14290.0e+00
WP_060878285.1 Ku protein [Streptomyces scabiei] 14280.0e+00
WP_059084211.1 Ku protein [Streptomyces scabiei] >dbj 14270.0e+00
WP_037728558.1 Ku protein [Streptomyces scabiei] >gb 14230.0e+00
WP_005480318.1 Ku protein [Streptomyces bottropensis] >gb 13730.0e+00
WP_079024123.1 Ku protein [Streptomyces scabiei] >gb 13440.0e+00
WP_086805162.1 Ku protein [Streptomyces scabiei] 13290.0e+00
WP_046914857.1 Ku protein [Streptomyces stelliscabiei] >gb 13280.0e+00
WP_060890724.1 Ku protein [Streptomyces europaeiscabiei] 13240.0e+00
WP_060902902.1 Ku protein [Streptomyces europaeiscabiei] 13180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear