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IDSCAB29521 TypeCDS
From6785594 nt length882
To6784713 aa length293
GeneligD pI6.35
Definitionputative DNA ligase M.W (Da)32253
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2946 putative DNA ligase4654.0e-132
coelSCO5308 hypothetical protein4679.0e-133
sgrSGR_2196 conserved hypothetical protein4048.0e-114
saceSACE_3549 DNA ligase (ATP)2763.0e-75
nfarnfa6770 putative ATP-dependent DNA ligase1941.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037728554.1 ATP-dependent DNA ligase [Streptomyces scabiei] >gb 14450.0e+00
WP_059084213.1 ATP-dependent DNA ligase [Streptomyces scabiei] >dbj 14150.0e+00
WP_020114010.1 ATP-dependent DNA ligase [Streptomyces bottropensis] 13800.0e+00
EMF54326.1 hypothetical protein SBD_3994 [Streptomyces bottropensis ATCC 254... 13790.0e+00
WP_046920259.1 ATP-dependent DNA ligase [Streptomyces stelliscabiei] >gb 13620.0e+00
WP_060890726.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] 13560.0e+00
WP_060906374.1 ATP-dependent DNA ligase, partial [Streptomyces scabiei] 13540.0e+00
WP_046705566.1 ATP-dependent DNA ligase [Streptomyces europaeiscabiei] 13380.0e+00
WP_037695266.1 ATP-dependent DNA ligase [Streptomyces scabiei] >gb 13300.0e+00
WP_045558960.1 MULTISPECIES: ATP-dependent DNA ligase [Streptomyces] >emb 13260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear