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IDSCAB31411 TypeCDS
From6587063 nt length1017
To6588079 aa length338
GeneoppC pI7.04
Definitionputative peptide ABC transporter permease protein M.W (Da)35269
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3147 putative peptide ABC transporter permease protein5213.0e-149
coelSCO5119 putative peptide transport system integral membrane protein5001.0e-142
sgrSGR_2411 putative peptide ABC transporter permease protein4662.0e-132
saceSACE_0846 ABC peptide transporter, permease component2748.0e-75

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component154-33891.93.7e-26

OppC_N1N-terminal TM domain of oligopeptide transport permease C61-9938.86.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906408.1 ABC transporter permease [Streptomyces scabiei] 13740.0e+00
WP_046915583.1 ABC transporter permease [Streptomyces stelliscabiei] >gb 13690.0e+00
WP_060883414.1 MULTISPECIES: ABC transporter permease [Streptomyces] 13680.0e+00
WP_059079235.1 ABC transporter permease [Streptomyces scabiei] >dbj 13680.0e+00
WP_086803120.1 ABC transporter permease [Streptomyces scabiei] 13550.0e+00
WP_093792409.1 ABC transporter permease [Streptomyces sp. cf124] >emb 13460.0e+00
WP_045559125.1 ABC transporter permease [Streptomyces sp. FxanaA7] 13460.0e+00
WP_055539301.1 ABC transporter permease [Streptomyces neyagawaensis] 13410.0e+00
WP_046704646.1 ABC transporter permease [Streptomyces europaeiscabiei] 13220.0e+00
WP_037694886.1 ABC transporter permease [Streptomyces scabiei] 13180.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear