-- | --

IDSCAB3201 TypeCDS
From9799783 nt length1464
To9798320 aa length487
Gene pI4.25
Definitionhypothetical protein M.W (Da)48461
Note AseI frg.Q
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5287 putative integrin-like protein5294.0e-151
sgrSGR_4784 conserved hypothetical protein2081.0e-54

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP4FG-GAP repeat40-74, 289-314, 350-386, 419-453121.87.5e-36

VCBS2Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella115-169, 245-30686.71.1e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037724797.1 VCBS repeat-containing protein [Streptomyces scabiei] >gb 20770.0e+00
WP_059078195.1 VCBS repeat-containing protein [Streptomyces scabiei] >dbj 20340.0e+00
WP_060903222.1 VCBS repeat-containing protein [Streptomyces europaeiscabiei... 17580.0e+00
WP_060893439.1 hypothetical protein [Streptomyces europaeiscabiei] 17510.0e+00
WP_055716399.1 VCBS repeat-containing protein, partial [Streptomyces torulo... 17450.0e+00
WP_055538793.1 hypothetical protein [Streptomyces neyagawaensis] 17180.0e+00
WP_055523680.1 hypothetical protein [Streptomyces ossamyceticus] 17080.0e+00
WP_009324191.1 FG-GAP repeat protein [Streptomyces ipomoeae] >gb 16490.0e+00
WP_030382262.1 MULTISPECIES: VCBS repeat-containing protein [Streptomyces] 13990.0e+00
WP_086751072.1 hypothetical protein [Streptomyces scabiei] 13830.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear