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IDSCAB34791 TypeCDS
From6223532 nt length756
To6224287 aa length251
Genesig pI6.64
Definitionputative RNA polymerase sigma factor M.W (Da)27939
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3351 putative RNA polymerase ECF-subfamily sigma factor3908.0e-110
coelSCO4908 putative RNA polymerase sigma factor (fragment)3523.0e-98
sgrSGR_2634 putative RNA polymerase ECF-subfamily sigma factor3514.0e-98
saceSACE_7161 RNA polymerase ECF sigma factor941.0e-20

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4179-23055.43.3e-15

Sigma70_r41Sigma-70, region 4183-23249.22.5e-13

Sigma70_r21Sigma-70 region 289-15244.11.2e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_078937092.1 SigE family RNA polymerase sigma factor [Streptomyces galbus... 11622.6e-161
WP_005480929.1 SigE family RNA polymerase sigma factor [Streptomyces bottro... 11553.1e-160
WP_046918357.1 SigE family RNA polymerase sigma factor [Streptomyces stelli... 11545.5e-160
WP_078853941.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 11545.6e-160
WP_079109535.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 11441.7e-158
WP_079076791.1 SigE family RNA polymerase sigma factor [Streptomyces europa... 11423.2e-158
WP_079024105.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 11381.7e-157
WP_048820146.1 SigE family RNA polymerase sigma factor [Streptomyces ipomoe... 11344.8e-157
WP_079081600.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 11337.1e-157
WP_075028321.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 11329.6e-157

PSORT result

LocalizationCertaintyPSORT said
Not Clear