ID	SCAB35181	Type	CDS
From	6178367	nt length	687
To	6179053	aa length	228
Gene	sig	pI	5.76
Definition	putative RNA polymerase sigma factor	M.W (Da)	24439
Note		AseI frg.	B
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	27-93	60.3	1e-16
	Sigma70_r4_2	1	Sigma-70, region 4	127-176	41.6	6.5e-11
	Sigma70_ECF	1	ECF sigma factor	7-164	23.2	4.9e-05

BLAST search result (top 10 hits)

ID	Description	Score	E-value
GAQ60842.1	ECF RNA polymerase sigma factor SigD [Streptomyces scabiei]	1063	1.5e-146
WP_046919408.1	RNA polymerase sigma factor [Streptomyces stelliscabiei] >gb...	1049	7.4e-145
WP_020665497.1	RNA polymerase sigma factor [Streptomyces bottropensis]	1043	5.7e-144
WP_037694439.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb...	1042	8.3e-144
WP_060903790.1	RNA polymerase sigma factor [Streptomyces europaeiscabiei]	1035	1.1e-142
EMF54731.1	sigma factor [Streptomyces bottropensis ATCC 25435]	1034	3.2e-142
WP_045562906.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces]	1017	5.9e-140
WP_033525290.1	RNA polymerase sigma factor [Streptomyces galbus]	1016	9.7e-140
WP_009300164.1	RNA polymerase sigma factor [Streptomyces ipomoeae] >gb	1013	2.4e-139
WP_060883553.1	RNA polymerase sigma factor [Streptomyces sp. 96-12]	1012	3.1e-139

PSORT result

Localization	Certainty	PSORT said
Not Clear

---