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IDSCAB40781 TypeCDS
From5547761 nt length2847
To5550607 aa length948
GenetopA pI9.36
Definitionputative DNA topoisomerase I M.W (Da)102520
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4621 putative DNA topoisomerase I16590.0e+00
coelSCO3543 probable DNA topoisomerase I16380.0e+00
sgrSGR_3301 putative DNA topoisomerase I16300.0e+00
saceSACE_0377 DNA topoisomerase I11120.0e+00
nfarnfa3670 putative DNA topoisomerase I10970.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Topoisom_bac1DNA topoisomerase149-591437.16e-131

Toprim_C_rpt4Topoisomerase C-terminal repeat641-692, 700-763, 770-820, 833-885198.21e-59

Toprim1Toprim domain14-13495.12.3e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060906598.1 DNA topoisomerase I [Streptomyces scabiei] 42280.0e+00
WP_059081679.1 DNA topoisomerase I [Streptomyces scabiei] >dbj 41960.0e+00
WP_086800105.1 DNA topoisomerase I [Streptomyces scabiei] 41680.0e+00
WP_037702547.1 DNA topoisomerase I [Streptomyces scabiei] >gb 41560.0e+00
WP_086753598.1 DNA topoisomerase I [Streptomyces scabiei] 41530.0e+00
WP_046916528.1 DNA topoisomerase I [Streptomyces stelliscabiei] >gb 41450.0e+00
WP_046707521.1 DNA topoisomerase I [Streptomyces europaeiscabiei] 41450.0e+00
WP_005475914.1 DNA topoisomerase I [Streptomyces bottropensis] >gb 41330.0e+00
WP_093791101.1 DNA topoisomerase I [Streptomyces sp. cf124] 41240.0e+00
WP_060883824.1 MULTISPECIES: DNA topoisomerase I [Streptomyces] 41230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear