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IDSCAB42591 TypeCDS
From5347692 nt length1476
To5346217 aa length491
Gene pI4.03
Definitionputative integrin-like protein M.W (Da)48926
Note AseI frg.C
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4477 putative integrin-like protein5493.0e-157

*avm, Streptomyces avermitilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FG-GAP5FG-GAP repeat103-140, 166-189, 278-319, 350-388, 421-447144.36.6e-43

VCBS3Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella111-184, 173-240, 282-36884.26.6e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060878605.1 hypothetical protein [Streptomyces scabiei] 21540.0e+00
WP_060881625.1 hypothetical protein [Streptomyces scabiei] 21170.0e+00
WP_033530325.1 hypothetical protein [Streptomyces galbus] 19070.0e+00
WP_067285017.1 hypothetical protein [Streptomyces jeddahensis] >gb 18200.0e+00
WP_055517311.1 VCBS repeat-containing protein [Streptomyces ossamyceticus] 17970.0e+00
WP_086751798.1 hypothetical protein [Streptomyces scabiei] 17490.0e+00
WP_059083789.1 hypothetical protein [Streptomyces scabiei] >dbj 17350.0e+00
WP_037702851.1 hypothetical protein [Streptomyces scabiei] >gb 17340.0e+00
WP_009320690.1 FG-GAP repeat protein [Streptomyces ipomoeae] >gb 17290.0e+00
WP_050398812.1 hypothetical protein [Streptomyces stelliscabiei] >gb 17190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear