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IDSCAB44671 TypeCDS
From5140581 nt length555
To5141135 aa length184
Genesig pI9.89
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)20543
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
saceSACE_7154 RNA polymerase ECF sigma factor1085.0e-25

*sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4103-15557.76e-16

Sigma70_r41Sigma-70, region 4108-15746.61.7e-12

Sigma70_r21Sigma-70 region 221-7620.80.00022

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037723293.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 9512.6e-131
WP_059079495.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 9191.8e-126
WP_086752073.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 9028.2e-124
WP_033532228.1 SigE family RNA polymerase sigma factor [Streptomyces galbus... 9011.1e-123
WP_046707136.1 SigE family RNA polymerase sigma factor [Streptomyces europa... 8922.0e-122
WP_037689896.1 SigE family RNA polymerase sigma factor [Streptomyces scabie... 8871.4e-121
WP_046916912.1 SigE family RNA polymerase sigma factor [Streptomyces stelli... 8705.4e-119
WP_005483183.1 SigE family RNA polymerase sigma factor [Streptomyces bottro... 8635.5e-118
WP_030670977.1 SigE family RNA polymerase sigma factor [Streptomyces cellul... 8262.5e-112
WP_030945611.1 SigE family RNA polymerase sigma factor [Streptomyces violac... 8229.0e-112

PSORT result

LocalizationCertaintyPSORT said
Not Clear