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IDSCAB46421 TypeCDS
From4945275 nt length3603
To4941673 aa length1200
GenecydCD pI9.77
Definitionputative ABC transporter ATP-binding protein M.W (Da)124374
Note AseI frg.C
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4258 putative ABC transporter ATP-binding protein16430.0e+00
coelSCO3947 putative ABC transporter16320.0e+00
sgrSGR_3644 putative ABC transporter ATP-binding protein and permease component14730.0e+00
saceSACE_0144 putative ABC transporter ATP-binding protein3252.0e-89
nfarnfa5870 putative ABC transporter ATP-binding protein3206.0e-88

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter351-499, 972-1120205.53.7e-61

ABC_membrane2ABC transporter transmembrane region21-280, 679-891136.41.3e-39

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_041669470.1 ABC transporter [Streptomyces scabiei] 36830.0e+00
KFG07311.1 ABC transporter [Streptomyces scabiei] 36740.0e+00
WP_037726026.1 ABC transporter [Streptomyces scabiei] 36680.0e+00
GAQ61747.1 ATP-binding/permease protein CydD [Streptomyces scabiei] 35990.0e+00
WP_059079643.1 ABC transporter [Streptomyces scabiei] 35910.0e+00
WP_060881662.1 thiol reductant ABC exporter subunit CydD, partial [Streptom... 24840.0e+00
WP_079107870.1 thiol reductant ABC exporter subunit CydD, partial [Streptom... 19770.0e+00
WP_079087569.1 thiol reductant ABC exporter subunit CydD, partial [Streptom... 19770.0e+00
WP_079088757.1 thiol reductant ABC exporter subunit CydD, partial [Streptom... 19720.0e+00
WP_079064666.1 thiol reductant ABC exporter subunit CydD, partial [Streptom... 19670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear