ID	SCAB47081	Type	CDS
From	4871248	nt length	471
To	4870778	aa length	156
Gene	sig	pI	7.42
Definition	putative RNA polymerase sigma factor	M.W (Da)	17713
Note		AseI frg.	O
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	94-146	62.9	1.5e-17
	Sigma70_r4	1	Sigma-70, region 4	99-148	49.5	2e-13
	Sigma70_r2	1	Sigma-70 region 2	4-66	34.7	1e-08
	Sigma70_ECF	1	ECF sigma factor	50-138	22.1	0.00011

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_079087571.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	812	2.8e-110
WP_086022961.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	805	1.1e-109
EMF52507.1	sigma factor [Streptomyces bottropensis ATCC 25435]	807	4.0e-109
WP_079158220.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	798	6.9e-109
WP_028797111.1	SigE family RNA polymerase sigma factor [Streptomyces stelli...	798	7.0e-109
WP_078531566.1	SigE family RNA polymerase sigma factor [Streptomyces bottro...	798	1.8e-108
WP_079082009.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	794	2.2e-108
WP_086802024.1	SigE family RNA polymerase sigma factor [Streptomyces scabie...	799	2.4e-108
WP_078853514.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	799	3.1e-108
SFN21276.1	RNA polymerase sigma-70 factor, sigma-E family [Streptomyces sp....	796	3.9e-108

PSORT result

Localization	Certainty	PSORT said
Not Clear

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