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IDSCAB50421 TypeCDS
From4530423 nt length207
To4530217 aa length68
GenecspB pI4.58
Definitionputative cold shock protein M.W (Da)7428
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3932 putative cold shock protein1373.0e-34
coelSCO4295 scoF4 cold shock protein1372.0e-34
sgrSGR_3226 putative cold shock protein1373.0e-34
nfarnfa3660 putative cold shock protein1002.0e-23

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-64106.24.9e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_008743607.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3493.3e-43
WP_030576453.1 cold-shock protein [Streptomyces sclerotialus] 3483.8e-43
WP_016436693.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3483.8e-43
WP_007382895.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3483.9e-43
WP_046709519.1 cold-shock protein [Streptomyces europaeiscabiei] 3475.2e-43
WP_030235075.1 MULTISPECIES: cold-shock protein [Streptomyces] 3469.2e-43
WP_004929928.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >ref 3451.0e-42
WP_030285851.1 cold-shock protein [Streptomyces catenulae] 3451.1e-42
WP_003967346.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >dbj 3451.3e-42
WP_093715500.1 cold-shock protein [Streptomyces alni] >emb 3451.3e-42

PSORT result

LocalizationCertaintyPSORT said
Not Clear