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IDSCAB52291 TypeCDS
From4333978 nt length870
To4334847 aa length289
Gene pI6.38
Definitionputative DNA-binding protein M.W (Da)32919
Note AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3783 putative DNA-binding protein5491.0e-157
coelSCO4441 putative DNA-binding protein5015.0e-143
sgrSGR_4257 putative DNA-binding protein5085.0e-145
saceSACE_1219 transcriptional regulator, XRE family2092.0e-55
nfarnfa41100 putative DNA-binding protein1962.0e-51

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7060.21.6e-16

HTH_31Helix-turn-helix18-6745.65e-12

HTH_191Helix-turn-helix domain15-7043.71.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059084038.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 14130.0e+00
WP_060906891.1 XRE family transcriptional regulator [Streptomyces scabiei] 14120.0e+00
WP_060878907.1 XRE family transcriptional regulator [Streptomyces scabiei] 14080.0e+00
WP_050398748.1 XRE family transcriptional regulator [Streptomyces stellisca... 13840.0e+00
WP_028797056.1 XRE family transcriptional regulator [Streptomyces bottropen... 13840.0e+00
WP_046917908.1 XRE family transcriptional regulator [Streptomyces stellisca... 13770.0e+00
WP_060903966.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 13720.0e+00
WP_060891307.1 XRE family transcriptional regulator [Streptomyces europaeis... 13660.0e+00
WP_037705437.1 XRE family transcriptional regulator [Streptomyces scabiei] ... 13640.0e+00
EMF50992.1 chitinase-promoter-binding protein [Streptomyces bottropensis ATC... 13500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear