ID	SCAB54751	Type	CDS
From	4061709	nt length	915
To	4062623	aa length	304
Gene	sig	pI	4.35
Definition	putative RNA polymerase sigma factor	M.W (Da)	33773
Note		AseI frg.	D
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	250-298	69.4	1.2e-19
	Sigma70_r3	1	Sigma-70 region 3	163-229	61.8	4.3e-17
	Sigma70_r2	1	Sigma-70 region 2	83-152	58.9	2.9e-16
	Sigma70_r4_2	1	Sigma-70, region 4	249-296	37.7	1e-09

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_059079868.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1488	0.0e+00
WP_046920016.1	RNA polymerase sigma factor SigF [Streptomyces stelliscabiei...	1484	0.0e+00
WP_037692975.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1468	0.0e+00
GAQ62022.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1467	0.0e+00
WP_020115597.1	RNA polymerase sigma factor SigF [Streptomyces bottropensis]	1457	0.0e+00
EMF50737.1	SigL-like sigma factor [Streptomyces bottropensis ATCC 25435]	1456	0.0e+00
WP_086761066.1	RNA polymerase sigma factor SigF [Streptomyces scabiei]	1443	0.0e+00
WP_033524921.1	RNA polymerase sigma factor SigF [Streptomyces galbus]	1440	0.0e+00
WP_045556445.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1438	0.0e+00
EKX67709.1	putative RNA polymerase sigma-F factor [Streptomyces ipomoeae 91-...	1426	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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