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IDSCAB55331 TypeCDS
From3989169 nt length726
To3988444 aa length241
Gene pI6.81
Definitionputative sigma 54 modulation protein/ribosomal protein S30EA M.W (Da)26586
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5067 putative sigma 54 modulation protein/ribosomal protein S30EA4322.0e-122
coelSCO3009 hypothetical protein4307.0e-122
sgrSGR_4527 conserved hypothetical protein3631.0e-101
saceSACE_6443 S30AE family protein1731.0e-44
nfarnfa46070 hypothetical protein1531.0e-38

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosom_S30AE_C1Sigma 54 modulation/S30EA ribosomal protein C terminus165-21879.21.2e-22

Ribosomal_S30AE1Sigma 54 modulation protein / S30EA ribosomal protein14-11176.22.4e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_020665656.1 MULTISPECIES: ribosomal subunit interface protein [Streptomy... 10864.9e-150
WP_086751848.1 ribosomal subunit interface protein [Streptomyces scabiei] 10856.2e-150
WP_045560743.1 MULTISPECIES: ribosomal subunit interface protein [Streptomy... 10857.5e-150
WP_086762032.1 ribosomal subunit interface protein [Streptomyces scabiei] 10761.4e-148
EMF50678.1 hypothetical protein SBD_8242 [Streptomyces bottropensis ATCC 254... 10801.5e-148
WP_046707988.1 ribosomal subunit interface protein [Streptomyces europaeisc... 10752.1e-148
WP_086803725.1 ribosomal subunit interface protein [Streptomyces scabiei] 10734.1e-148
WP_079024436.1 ribosomal subunit interface protein [Streptomyces scabiei] >... 10718.7e-148
WP_055539978.1 ribosomal subunit interface protein [Streptomyces neyagawaen... 10622.3e-146
WP_055520707.1 MULTISPECIES: ribosomal subunit interface protein [Streptomy... 10561.6e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear