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IDSCAB55751 TypeCDS
From3929064 nt length555
To3928510 aa length184
GenesmpB pI10.58
Definitionputative small protein B M.W (Da)20872
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5107 putative small protein B3108.0e-86
coelSCO2966 smpB small protein B homologue2709.0e-74
sgrSGR_4561 putative small protein B2507.0e-68
saceSACE_1108 SsrA-binding protein1978.0e-52
nfarnfa44800 putative small protein B1891.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SmpB1SmpB protein33-97106.35.3e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GAQ63586.1 smpB [Streptomyces scabiei] 8393.3e-114
WP_037729458.1 SsrA-binding protein SmpB [Streptomyces scabiei] >gb 8221.0e-111
SFN78913.1 SsrA-binding protein [Streptomyces sp. cf124] 8193.7e-111
WP_060906996.1 SsrA-binding protein SmpB [Streptomyces scabiei] 8183.7e-111
WP_059081189.1 SsrA-binding protein SmpB [Streptomyces scabiei] 8167.1e-111
SDP45167.1 SsrA-binding protein [Streptomyces sp. cf386] 8168.7e-111
CUW28836.1 SsrA-binding protein [Streptomyces reticuli] 8054.0e-109
WP_037703640.1 MULTISPECIES: SsrA-binding protein SmpB [Streptomyces] >gb 8036.5e-109
SED21279.1 SsrA-binding protein [Streptomyces sp. KS_5] >emb 8039.8e-109
WP_015660036.1 SsrA-binding protein SmpB [Streptomyces davawensis] >emb 8021.1e-108

PSORT result

LocalizationCertaintyPSORT said
Not Clear