ID	SCAB55901	Type	CDS
From	3911791	nt length	576
To	3911216	aa length	191
Gene	sig	pI	7.9
Definition	putative RNA polymerase sigma factor	M.W (Da)	21536
Note		AseI frg.	J
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r2	1	Sigma-70 region 2	33-101	58.2	4.5e-16
	Sigma70_r4	1	Sigma-70, region 4	133-181	52.0	3.3e-14
	Sigma70_r4_2	1	Sigma-70, region 4	129-179	35.7	4.7e-09
	Sigma70_ECF	1	ECF sigma factor	85-176	26.1	6.1e-06

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_079049401.1	MULTISPECIES: RNA polymerase subunit sigma [Streptomyces]	978	3.4e-135
WP_078493447.1	RNA polymerase subunit sigma [Streptomyces sclerotialus]	962	1.0e-132
GAP50971.1	ECF subfamily RNA polymerase sigma-24 subunit [Streptomyces azur...	951	3.6e-131
WP_030054429.1	RNA polymerase sigma factor SigL [Streptomyces viridosporus]	950	5.5e-131
WP_028807269.1	MULTISPECIES: RNA polymerase sigma factor SigL [Streptomyces...	949	8.4e-131
EKX67136.1	sigma-70 region 2 [Streptomyces ipomoeae 91-03]	948	8.9e-131
WP_007382403.1	MULTISPECIES: RNA polymerase sigma factor SigL [Streptomyces...	948	1.1e-130
WP_079001457.1	RNA polymerase subunit sigma [Streptomyces sp. AS58]	948	1.3e-130
WP_003990602.1	MULTISPECIES: RNA polymerase sigma factor SigL [Streptomyces...	947	1.9e-130
WP_078947779.1	RNA polymerase subunit sigma [Streptomyces griseus]	945	3.7e-130

PSORT result

Localization	Certainty	PSORT said
Not Clear

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