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IDSCAB57821 TypeCDS
From3712958 nt length603
To3713560 aa length200
Geneorn pI4.94
Definitionputative 3'->5' exoribonuclease M.W (Da)22047
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5260 putative 3'->5' exoribonuclease3813.0e-107
coelSCO2793 ornA oligoribonuclease3774.0e-106
sgrSGR_4741 oligoribonuclease3644.0e-102
saceSACE_1292 oligoribonuclease (3'->5' exoribonuclease)2353.0e-63
nfarnfa12870 putative oligoribonuclease2452.0e-66

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_T1Exonuclease6-16886.62.5e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059083003.1 oligoribonuclease [Streptomyces scabiei] >dbj 9612.4e-132
WP_046918406.1 oligoribonuclease [Streptomyces stelliscabiei] >gb 9472.8e-130
WP_005486517.1 oligoribonuclease [Streptomyces bottropensis] >gb 9413.0e-129
WP_067236233.1 oligoribonuclease [Streptomyces longwoodensis] >gb 9301.2e-127
WP_079178023.1 oligoribonuclease [Streptomyces mangrovisoli] >gb 9292.0e-127
WP_055511897.1 MULTISPECIES: oligoribonuclease [Streptomyces] 9274.3e-127
WP_018565674.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 9274.5e-127
WP_030669746.1 oligoribonuclease [Streptomyces cellulosae] 9257.1e-127
WP_053848883.1 oligoribonuclease [Streptomyces sp. NRRL B-24085] 9258.3e-127
WP_037819210.1 MULTISPECIES: oligoribonuclease [Streptomyces] >gb 9258.6e-127

PSORT result

LocalizationCertaintyPSORT said
Not Clear