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IDSCAB58781 TypeCDS
From3611702 nt length2262
To3609441 aa length753
GenerecD pI6.53
Definitionputative exodeoxyribonuclease V M.W (Da)81560
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5329 putative exodeoxyribonuclease V14140.0e+00
coelSCO2737 putative deoxyribonuclease.13730.0e+00
sgrSGR_4825 putative exodeoxyribonuclease V13130.0e+00
saceSACE_3353 helicase RecD/TraA11130.0e+00
nfarnfa25470 putative RecD protein869.0e-18

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_301AAA domain352-530156.27.2e-46

HHH_41Helix-hairpin-helix containing domain155-245125.94.1e-37

AAA_191AAA domain356-485114.74e-33

UvrD_C_21UvrD-like helicase C-terminal domain674-72272.02.3e-20

HHH_51Helix-hairpin-helix domain105-15432.11.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037729584.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] ... 34580.0e+00
WP_060879071.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] 34500.0e+00
WP_059080940.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] ... 34290.0e+00
WP_046917421.1 ATP-dependent RecD-like DNA helicase [Streptomyces stellisca... 33660.0e+00
WP_086756917.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] 33640.0e+00
WP_020115488.1 ATP-dependent RecD-like DNA helicase [Streptomyces bottropen... 33590.0e+00
WP_060884627.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [Streptom... 33310.0e+00
WP_045557638.1 MULTISPECIES: ATP-dependent RecD-like DNA helicase [Streptom... 33300.0e+00
WP_086752454.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] 33150.0e+00
WP_086796557.1 ATP-dependent RecD-like DNA helicase [Streptomyces scabiei] 33130.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear