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IDSCAB59091 TypeCDS
From3573765 nt length669
To3574433 aa length222
Gene pI10.49
Definitionputative membrane protein M.W (Da)22544
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5353 putative secreted protein2184.0e-58
coelSCO2712 putative membrane protein1941.0e-50

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2);

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_079081757.1 lipopolysaccharide biosynthesis protein [Streptomyces scabie... 8091.7e-108
KFG03246.1 lipopolysaccharide biosynthesis protein [Streptomyces scabiei] 7691.7e-102
WP_061451592.1 hypothetical protein, partial [Streptomyces scabiei] 7611.5e-101
WP_060907077.1 hypothetical protein, partial [Streptomyces scabiei] 7601.9e-101
WP_046919699.1 LPS biosynthesis protein [Streptomyces stelliscabiei] 7405.5e-98
WP_005479515.1 hypothetical protein [Streptomyces bottropensis] >gb 7353.3e-97
WP_079104391.1 lipopolysaccharide biosynthesis protein [Streptomyces europa... 6999.2e-92
KND45486.1 lipopolysaccharide biosynthesis protein [Streptomyces stelliscabi... 6989.2e-92
WP_046709397.1 LPS biosynthesis protein [Streptomyces europaeiscabiei] 6981.4e-91
WP_086749559.1 lipopolysaccharide biosynthesis protein [Streptomyces scabie... 6902.0e-90

PSORT result

LocalizationCertaintyPSORT said
Not Clear