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IDSCAB72001 TypeCDS
From2187393 nt length1467
To2185927 aa length488
Gene pI5.23
Definitionputative GTP-binding protein M.W (Da)53186
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6524 putative GTP-binding protein8910.0e+00
coelSCO1758 putative GTP binding protein8970.0e+00
sgrSGR_5741 putative GTP-binding protein8670.0e+00
saceSACE_5232 small GTP-binding protein domain5615.0e-161
nfarnfa20130 putative GTP-binding protein5654.0e-162

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MMR_HSR1250S ribosome-binding GTPase51-165, 225-343163.81.2e-48

KH_dom-like1KH-domain-like of EngA bacterial GTPase enzymes, C-terminal399-47789.11.6e-25

FeoB_N2Ferrous iron transport protein B51-167, 225-38885.72.1e-24

GTP_EFTU2Elongation factor Tu GTP binding domain52-170, 299-39174.95.2e-21

AIG11AIG1 family52-15446.52.5e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_059082143.1 ribosome biogenesis GTPase Der [Streptomyces scabiei] >dbj 20650.0e+00
WP_045556962.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 20370.0e+00
WP_033531540.1 ribosome biogenesis GTPase Der [Streptomyces galbus] 20360.0e+00
WP_046919878.1 ribosome biogenesis GTPase Der [Streptomyces stelliscabiei] ... 20340.0e+00
WP_005484958.1 ribosome biogenesis GTPase Der [Streptomyces bottropensis] >... 20320.0e+00
WP_086747759.1 ribosome biogenesis GTPase Der [Streptomyces scabiei] 20260.0e+00
WP_086752709.1 ribosome biogenesis GTPase Der [Streptomyces scabiei] 20110.0e+00
WP_060891909.1 ribosome biogenesis GTPase Der [Streptomyces europaeiscabiei... 20110.0e+00
WP_046709780.1 ribosome biogenesis GTPase Der [Streptomyces europaeiscabiei... 20110.0e+00
WP_055542522.1 ribosome biogenesis GTPase Der [Streptomyces neyagawaensis] 19930.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear