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IDSCAB73621 TypeCDS
From2009660 nt length2850
To2006811 aa length949
GenehelY pI7.03
Definitionputative ATP-dependent RNA helicase M.W (Da)105657
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6695 putative ATP-dependent RNA helicase17480.0e+00
coelSCO1631 putative helicase17600.0e+00
sgrSGR_5873 putative ATP-dependent RNA helicase16340.0e+00
saceSACE_2265 putative ATP-dependent RNA helicase10750.0e+00
nfarnfa31620 putative ATP-dependent RNA helicase9660.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DSHCT1DSHCT (NUC185) domain774-943128.32e-37

DEAD1DEAD/DEAH box helicase53-20069.42.8e-19

ResIII1Type III restriction enzyme, res subunit50-19938.01.5e-09

rRNA_proc-arch1rRNA-processing arch domain510-61130.43.1e-07

Helicase_C1Helicase conserved C-terminal domain375-45423.26.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060879414.1 RNA helicase [Streptomyces scabiei] 45530.0e+00
WP_059082009.1 RNA helicase [Streptomyces scabiei] >dbj 45330.0e+00
WP_005485252.1 helY protein [Streptomyces bottropensis] >gb 44930.0e+00
WP_046919482.1 RNA helicase [Streptomyces stelliscabiei] >gb 44760.0e+00
WP_037701782.1 RNA helicase [Streptomyces scabiei] >gb 44530.0e+00
WP_086754576.1 RNA helicase [Streptomyces scabiei] 44420.0e+00
WP_046707749.1 RNA helicase [Streptomyces europaeiscabiei] 44310.0e+00
WP_060891973.1 RNA helicase [Streptomyces europaeiscabiei] 44300.0e+00
WP_086747783.1 RNA helicase [Streptomyces scabiei] 44270.0e+00
WP_060904256.1 RNA helicase [Streptomyces europaeiscabiei] 44260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear