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IDSCAB74911 TypeCDS
From1865834 nt length1776
To1864059 aa length591
GenesecD pI10.03
Definitionputative preprotein translocase SecD subunit M.W (Da)61231
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6837 putative preprotein translocase SecD subunit7660.0e+00
coelSCO1516 secD protein-export membrane protein7670.0e+00
sgrSGR_6019 protein-export membrane protein SecD6820.0e+00
saceSACE_2025 preprotein translocase subunit SecD3034.0e-83
nfarnfa36910 putative protein exporter membrane protein3232.0e-89

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SecD_SecF1Protein export membrane protein376-55149.33.3e-13

MMPL1MMPL family396-55337.31.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_060879441.1 protein translocase subunit SecD [Streptomyces scabiei] 22410.0e+00
WP_037725673.1 protein translocase subunit SecD [Streptomyces scabiei] >gb 22380.0e+00
WP_060907446.1 protein translocase subunit SecD [Streptomyces scabiei] 22280.0e+00
WP_059081909.1 protein translocase subunit SecD [Streptomyces scabiei] >dbj... 22270.0e+00
WP_046919644.1 protein translocase subunit SecD [Streptomyces stelliscabiei... 19500.0e+00
WP_005485438.1 protein translocase subunit SecD [Streptomyces bottropensis]... 19410.0e+00
WP_046704893.1 protein translocase subunit SecD [Streptomyces europaeiscabi... 18710.0e+00
WP_086748861.1 protein translocase subunit SecD [Streptomyces scabiei] 18630.0e+00
WP_086760309.1 protein translocase subunit SecD [Streptomyces scabiei] 18570.0e+00
WP_033532589.1 protein translocase subunit SecD [Streptomyces galbus] 18500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear