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IDSCAB81811 TypeCDS
From1078598 nt length924
To1077675 aa length307
GeneopuBC pI4.52
Definitionputative ABC transporter substrate-binding protein M.W (Da)32133
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2178 putative ABC transporter substrate-binding protein2471.0e-66
coelSCO6065 putative secreted substrate-binding protein2524.0e-68
sgrSGR_4100 putative ABC transporter substrate-binding protein1202.0e-28
saceSACE_6409 putative ABC transport system substrate binding component1918.0e-50
nfarnfa47080 putative transporter substrate-binding protein741.0e-14

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system40-301175.61.2e-51

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
KFG06717.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 13740.0e+00
WP_060907602.1 glycine/betaine ABC transporter substrate-binding protein [S... 13630.0e+00
GAQ62763.1 glycine betaine/carnitine/choline-binding protein OpuCC precurso... 13330.0e+00
WP_059080610.1 glycine/betaine ABC transporter substrate-binding protein [S... 13310.0e+00
KND46381.1 glycine/betaine ABC transporter substrate-binding protein [Strept... 13180.0e+00
WP_046913741.1 glycine/betaine ABC transporter substrate-binding protein [S... 13170.0e+00
WP_005474950.1 hypothetical protein [Streptomyces bottropensis] >gb 12992.7e-180
WP_086749673.1 glycine/betaine ABC transporter substrate-binding protein [S... 12646.4e-175
WP_060907605.1 glycine/betaine ABC transporter substrate-binding protein [S... 12576.5e-174
WP_060885702.1 MULTISPECIES: glycine/betaine ABC transporter substrate-bind... 12561.0e-173

PSORT result

LocalizationCertaintyPSORT said
Not Clear